{"id":368,"date":"2019-03-12T14:20:37","date_gmt":"2019-03-12T14:20:37","guid":{"rendered":"https:\/\/wp.uthscsa.edu\/dcsa\/?page_id=368"},"modified":"2020-09-03T13:06:46","modified_gmt":"2020-09-03T13:06:46","slug":"biobanking-genome-analysis","status":"publish","type":"page","link":"https:\/\/lsom.uthscsa.edu\/dcsa\/research\/cores-facilities\/biobanking-genome-analysis\/","title":{"rendered":"Biobanking &amp; Genome Analysis"},"content":{"rendered":"<div class=\"wpb-content-wrapper\"><p>[vc_row][vc_column width=&#8221;2\/3&#8243;][vc_column_text]<\/p>\n<h3>Mission:<\/h3>\n<p>The mission of the Biobanking &amp; Genome Analysis is to provide state-of-the-art genomic services to UT Health investigators and the local scientific community in an economical and timely manner.<\/p>\n<table>\n<tbody>\n<tr>\n<td><\/td>\n<td><span style=\"font-weight: 400;\">Equipment:<\/span><\/p>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Life Technologies Ion Torrent PGM sequencer<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Illumina BeadXpress System<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Illumina iScan Microarray Scanner<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Applied Biosystems 7900HT Sequence Detection System<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Applied Biosystems TaqMan Low Density Array Thermal Cycling Block<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Agilent Bioanalyzer<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Thermo Scientific NanoDrop Spectrophotometer<\/span><\/li>\n<\/ul>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<h3><span style=\"font-weight: 400;\">Illumina Microarray <\/span>Services:<\/h3>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Whole genome SNP genotyping and copy number variation analysis<\/span>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Omni family of microarrays<\/span><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Whole genome gene expression microarrays<\/span>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Human HT-12 <\/span><span style=\"font-weight: 400;\">$184.50\/sample for multiples of 12 samples including BeadChip array<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Mouse WG-6 <\/span><span style=\"font-weight: 400;\">$308.00\/sample for multiples of 6 samples including BeadChip array<\/span><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">Whole genome methylation microarrays<\/span>\n<ul>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">HumanMethylation27<\/span><\/li>\n<li style=\"font-weight: 400;\"><span style=\"font-weight: 400;\">HumanMethylation450<\/span><\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<table>\n<tbody>\n<tr>\n<td colspan=\"3\"><strong>Biobanking &amp; Genome Analysis Contact:<\/strong><\/td>\n<td><strong>Office<\/strong><\/td>\n<td><strong>Phone<\/strong><\/td>\n<td><strong>Fax<\/strong><\/td>\n<\/tr>\n<tr>\n<td><span style=\"font-weight: 400;\">Teresa L. Johnson-Pais<\/span><span style=\"font-weight: 400;\">, Ph.D.<\/span><\/td>\n<td><span style=\"font-weight: 400;\">Co-Director<\/span><\/td>\n<td><span style=\"font-weight: 400;\">Email<\/span><\/td>\n<td><span style=\"font-weight: 400;\">528L<\/span><\/td>\n<td><span style=\"font-weight: 400;\">(210) 567-6571<\/span><\/td>\n<td><span style=\"font-weight: 400;\">(210) 567-6781<\/span><\/td>\n<\/tr>\n<tr>\n<td><span style=\"font-weight: 400;\">Robin J. Leach<\/span><span style=\"font-weight: 400;\">, Ph.D.<\/span><\/td>\n<td><span style=\"font-weight: 400;\">Co-Director<\/span><\/td>\n<td><span style=\"font-weight: 400;\">Email<\/span><\/td>\n<td><span style=\"font-weight: 400;\">552C<\/span><\/td>\n<td><span style=\"font-weight: 400;\">(210) 567-6947<\/span><\/td>\n<td><span style=\"font-weight: 400;\">(210) 567-6781<\/span><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>[\/vc_column_text][\/vc_column][vc_column width=&#8221;1\/3&#8243;] \n        <a class=\"panel no-equilizer panel-mobile text-center colorized\" href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/research\/cores-facilities\/biobanking-genome-analysis\/genotyping\/\" title=\"\" target=\"\">\n            <span class=\"circle close2x mid-icon\"><span><i class=\"fa fa-flask\"><\/i><\/span><\/span><br>\n            <h3 >Genotyping<\/h3>\n            <p><\/p>\n        <\/a> \n        <a class=\"panel no-equilizer panel-mobile text-center colorized colorized-institutional\" href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/research\/cores-facilities\/biobanking-genome-analysis\/services\/\" title=\"\" target=\"\">\n            <span class=\"circle close2x mid-icon\"><span><i class=\"fa fa-flask\"><\/i><\/span><\/span><br>\n            <h3 >Genomic Services<\/h3>\n            <p><\/p>\n        <\/a>[vc_column_text el_class=&#8221;panel outline&#8221;]<\/p>\n<h2>Illumina Genotyping Methodology<\/h2>\n<ul>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-GoldenGateGenotypingOverview.pdf\">Golden Gate Genotyping Overview<\/a><\/li>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-GoldenGateDesignTechNote.pdf\">Golden Gate Technote<\/a><\/li>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-MouseMDLinkagePanel.pdf\">Mouse LD and MD Linkage Panels<\/a><\/li>\n<\/ul>\n<h2>Agilent Bioanalyzer<\/h2>\n<ul>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-AgilentBioanalyzer-1.pdf\">Getting Started Agilent Bioanalyzer<\/a><\/li>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-AgilentBioanalyzer-1.pdf\">Sample Submission Form<\/a><\/li>\n<\/ul>\n<h2>Gene Expression<\/h2>\n<ul>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-geneexpressionGettingStarted-1.pdf\">Getting Started<\/a><\/li>\n<li><a href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/wp-content\/uploads\/sites\/64\/2019\/03\/genomics-geneexpressionSampleSubmissionGuidelines-1.pdf\">Sample Submission Guidelines<\/a><\/li>\n<\/ul>\n<p>[\/vc_column_text][\/vc_column][\/vc_row]<\/p>\n<\/div>","protected":false},"excerpt":{"rendered":"<p>[vc_row][vc_column width=&#8221;2\/3&#8243;][vc_column_text] Mission: The mission of the Biobanking &amp; Genome Analysis is to provide state-of-the-art genomic services to UT Health investigators and the local scientific community in an economical and timely manner. Equipment: Life Technologies Ion Torrent PGM sequencer Illumina BeadXpress System Illumina iScan Microarray Scanner Applied Biosystems 7900HT Sequence Detection System Applied Biosystems TaqMan [&hellip;]<\/p>\n","protected":false},"author":159,"featured_media":0,"parent":334,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-templates\/child-page.php","meta":{"footnotes":""},"class_list":["post-368","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.2 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Biobanking &amp; Genome Analysis - Cell Systems and Anatomy<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/lsom.uthscsa.edu\/dcsa\/research\/cores-facilities\/biobanking-genome-analysis\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Biobanking &amp; Genome Analysis - Cell Systems and Anatomy\" \/>\n<meta property=\"og:description\" content=\"[vc_row][vc_column width=&#8221;2\/3&#8243;][vc_column_text] Mission: The mission of the Biobanking &amp; Genome Analysis is to provide state-of-the-art genomic services to UT Health investigators and the local scientific community in an economical and timely manner. 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